Hi band.Atul,
You can achive this simply, you may have a Panel for the Popup. In that panel place a div control with style "overflow:auto" as
<asp:Panel ID="ModalPopUpPanel" runat="server" style="display:none">
<div style="overflow:auto">
<%--put all the content here--%>
</div>
</asp:Panel>
the ModalPopUpPanel is just to show you where you need to place the div and how to code overflow:auto, you need not to alter your existing Panel, but wrap evey other content in the div.
Thanks and Regards,
Rk_Hirpara